Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800066.1_cds_XP_016467854.1_6008
CDS Infomation

[gene=LOC107790438] [db_xref=GeneID:107790438] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016467854.1] [location=complement(join(21523..22143,22803..23720))] [gbkey=CDS]
Sequence

ATGGAGATTTACTCCTCCTCTGTCAACTTAGTTTCATTTCTCCTCTTCTTCTCCTCCCTT
TTTATTATAGTGCTAGTTAGAAAATGGAGAAATTCAGAAACCAGTAGCCAAAAACAAAGG
TTGCCTCCAGGTCCATGGCGACTTCCACTTATTGGAAGTTTACATCACTTAATCGGAGCA
CATCCACATCGCATTTTTAGAGATTTAGCTCGAAAATATGGTCCTGTTATGTACTTAGAA
CTAGGGGAAGTTCCTACAGTGATCATATCATCACCTTCTGCGGCAAAAGAAACTTTAAAA
ACTCACGATCTTGCCTTTTCTAATAGGCCACAGTTTACATCCACATATATTGTTATGTAC
AATAATAAAGACATTGCGTTTGCAGAATACGGTGATTACTGGAAACAAATGCGAAAAATT
TGTATTATGGAACTTCTAAGTGCAAGGATGGTCAAATCATTTAGCTCGATTCGAAAAGAT
GAGCTTTCGAGTCTCCTTTCATCAGTTCAATCCGTTAAGGGTACTTCTGAAGTCAATATG
ACAGAAAAAATTGTTAGGTTTGCGAGTTCTGTGACATGTCGATTAGTTTTTGGAAAATTA
GGCAAAGATCGAGAGCTGTTGATTGAATTGATGAAAAAAACGCTGTTATTAGCAGGAGGA
GATGTGGGTGATTTGTTCCCTTCGTGGAAGTTACTTTACAAAATGAGTGGAGCAAAATCA
AGATTGGTAAAAATGCATCAAGAGGTTGATTCAGTTCTAGATAACATAGTTAATGAGCAT
ATTAGGAGTCGAGCAGACGGGAACAAGGGAAATGGTGAGTATGGAGGTGAAGATTTGGTT
GATGTTTTCCTAAGAATTCAGGAGAATGACCAACTTCAATTTCCAATCACCAATGACCAC
ATAAAAGCTGTGATTTTGGACATGTTTACTGCTGGAACTGAAACTTCATCTACAGCTATT
ATTTGGGCAATGTCAGAACTGATGAAGAACCCAAATGTCATGGCCAAGGCACAAAGTGAA
GTGAGACAAGCCTTCAAAGGGAAATCGAGTTTTGATGAAGAAGATCTTGATAATTTGCCG
TACCTAATGTTAGTGGTTAAAGAAACATTAAGGCTACACGCTCCAAGTATATTGCATAGG
GAATGTAGGGAACAAACATGTATTGATGGATATACAATACCTTCTAAGGCCACAGTACTA
GTTAATACATGGGCAATTGGAAGAGATCCAGAAGTTTGGAACAACCCTGAGAGTTTTATA
CCAGAGAGATTTGAAAATTCTTTTATTGACTATTTGGGAAATCACTTTGAGTTTATTCCA
TTTGGTTCGGGAAAAAGAATTTGTCCAGGAATGCAGTTTGGTTTAGCTAATTTTAGATAT
CCTTTGGCTCGGCTCCTCTACCACTTCAACTGGGAGCTTCCATATGGAACTAGTCCGAAA
GATTTGGATATGAGTGAGAAACCTGGAATGAGTGCAGCGAAAGAGAAAGATCTGTACGTA
ATTGCCAAAAACGATGAGTGTTTGGATGTCATGCTTTAG

Peptide Sequence

PEP ID

XP_016467854.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEIYSSSVNLVSFLLFFSSLFIIVLVRKWRNSETSSQKQRLPPGPWRLPLIGSLHHLIGA
HPHRIFRDLARKYGPVMYLELGEVPTVIISSPSAAKETLKTHDLAFSNRPQFTSTYIVMY
NNKDIAFAEYGDYWKQMRKICIMELLSARMVKSFSSIRKDELSSLLSSVQSVKGTSEVNM
TEKIVRFASSVTCRLVFGKLGKDRELLIELMKKTLLLAGGDVGDLFPSWKLLYKMSGAKS
RLVKMHQEVDSVLDNIVNEHIRSRADGNKGNGEYGGEDLVDVFLRIQENDQLQFPITNDH
IKAVILDMFTAGTETSSTAIIWAMSELMKNPNVMAKAQSEVRQAFKGKSSFDEEDLDNLP
YLMLVVKETLRLHAPSILHRECREQTCIDGYTIPSKATVLVNTWAIGRDPEVWNNPESFI
PERFENSFIDYLGNHFEFIPFGSGKRICPGMQFGLANFRYPLARLLYHFNWELPYGTSPK
DLDMSEKPGMSAAKEKDLYVIAKNDECLDVML

Transcript Sequence

Gene sequence data has not been registered.